Genetic variants in TNFA, LTA, TLR2 and TLR4 genes and risk of sepsis in patients with severe trauma: nested case-control study in a level-1 trauma centre in SERBIA
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Аутори
Đurić, OliveraAnđelković, Marina
Vreca, Misa
Skakić, Anita
Pavlović, Sonja
Novaković, Ivana
Jovanović, Bojan
Skodrić-Trifunović, Vesna
Marković-Denić, Ljiljana
Чланак у часопису (Објављена верзија)
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Introduction: Single nucleotide variants (SNVs) represent important genetic risk factors for susceptibility to posttraumatic sepsis and a potential target for immunotherapy. We aimed to evaluate the association between 8 different SNVs within tumor necrosis factor alpha (TNFA), lymphotoxin alpha (LTA) and Tolllike receptor (TLR2 and TLR4) genes and the risk of posttraumatic sepsis. Methods: Nested case-control study was conducted in the emergency department of the Clinical Centre of Serbia including 228 traumatized patients (44 with sepsis and 184 without sepsis). To compare the results of trauma subjects with the data from the general population, a control group of 101 healthy persons was included in the study. Genotyping of TNFA (rs1800629 and rs361525), LTA (rs909253), TLR2 (rs3804099, rs4696480 and rs3804100), and TLR4 (rs4986790 and rs4986791) was performed for all patients within all three groups using the real-time PCR method. MutationTaster database and in silico software SIFT ...were used to predict the variant pathogenic effect. Results: Carriage of the G allele of the TNFA rs1800629 gene variant (OR 2.1, 95%CI 1.06-4.16) and T allele-carriage of the TLR4 rs4986791 genetic variant (OR 3.02, 95%CI 1.31-6.57) were associated with significantly higher risk of sepsis in trauma patients when compared to the general population prone to sepsis and traumatized patients without developing a sepsis, respectively. Of these two variants, only variant in TLR4 gene (rs4986791) has been labeled as disease causing by both the MutationTaster database and the in-silico software SIFT, which further supports the role of this variant in various pathologies including sepsis. For the remaining six variants no significant association with the susceptibility to sepsis was detected. Conclusions: Carriage of the G allele of the TNFA rs1800629 gene variant and T allele-carriage of the TLR4 rs4986791 genetic variant confer significant risk of posttraumatic sepsis. TLR4 gene variants (rs4986790 and rs4986791) has been labelled as disease causing.
Кључне речи:
Trauma / TNFA / TLR / Single nucleotide variants / Sepsis / LTAИзвор:
Injury-International Journal of the Care of the Injured, 2021, 52, 3, 419-425Издавач:
- Elsevier Sci Ltd, Oxford
DOI: 10.1016/j.injury.2020.12.039
ISSN: 0020-1383
PubMed: 33436266
WoS: 000631259400018
Scopus: 2-s2.0-85099134882
Институција/група
Institut za molekularnu genetiku i genetičko inženjerstvoTY - JOUR AU - Đurić, Olivera AU - Anđelković, Marina AU - Vreca, Misa AU - Skakić, Anita AU - Pavlović, Sonja AU - Novaković, Ivana AU - Jovanović, Bojan AU - Skodrić-Trifunović, Vesna AU - Marković-Denić, Ljiljana PY - 2021 UR - https://imagine.imgge.bg.ac.rs/handle/123456789/1426 AB - Introduction: Single nucleotide variants (SNVs) represent important genetic risk factors for susceptibility to posttraumatic sepsis and a potential target for immunotherapy. We aimed to evaluate the association between 8 different SNVs within tumor necrosis factor alpha (TNFA), lymphotoxin alpha (LTA) and Tolllike receptor (TLR2 and TLR4) genes and the risk of posttraumatic sepsis. Methods: Nested case-control study was conducted in the emergency department of the Clinical Centre of Serbia including 228 traumatized patients (44 with sepsis and 184 without sepsis). To compare the results of trauma subjects with the data from the general population, a control group of 101 healthy persons was included in the study. Genotyping of TNFA (rs1800629 and rs361525), LTA (rs909253), TLR2 (rs3804099, rs4696480 and rs3804100), and TLR4 (rs4986790 and rs4986791) was performed for all patients within all three groups using the real-time PCR method. MutationTaster database and in silico software SIFT were used to predict the variant pathogenic effect. Results: Carriage of the G allele of the TNFA rs1800629 gene variant (OR 2.1, 95%CI 1.06-4.16) and T allele-carriage of the TLR4 rs4986791 genetic variant (OR 3.02, 95%CI 1.31-6.57) were associated with significantly higher risk of sepsis in trauma patients when compared to the general population prone to sepsis and traumatized patients without developing a sepsis, respectively. Of these two variants, only variant in TLR4 gene (rs4986791) has been labeled as disease causing by both the MutationTaster database and the in-silico software SIFT, which further supports the role of this variant in various pathologies including sepsis. For the remaining six variants no significant association with the susceptibility to sepsis was detected. Conclusions: Carriage of the G allele of the TNFA rs1800629 gene variant and T allele-carriage of the TLR4 rs4986791 genetic variant confer significant risk of posttraumatic sepsis. TLR4 gene variants (rs4986790 and rs4986791) has been labelled as disease causing. PB - Elsevier Sci Ltd, Oxford T2 - Injury-International Journal of the Care of the Injured T1 - Genetic variants in TNFA, LTA, TLR2 and TLR4 genes and risk of sepsis in patients with severe trauma: nested case-control study in a level-1 trauma centre in SERBIA EP - 425 IS - 3 SP - 419 VL - 52 DO - 10.1016/j.injury.2020.12.039 ER -
@article{ author = "Đurić, Olivera and Anđelković, Marina and Vreca, Misa and Skakić, Anita and Pavlović, Sonja and Novaković, Ivana and Jovanović, Bojan and Skodrić-Trifunović, Vesna and Marković-Denić, Ljiljana", year = "2021", abstract = "Introduction: Single nucleotide variants (SNVs) represent important genetic risk factors for susceptibility to posttraumatic sepsis and a potential target for immunotherapy. We aimed to evaluate the association between 8 different SNVs within tumor necrosis factor alpha (TNFA), lymphotoxin alpha (LTA) and Tolllike receptor (TLR2 and TLR4) genes and the risk of posttraumatic sepsis. Methods: Nested case-control study was conducted in the emergency department of the Clinical Centre of Serbia including 228 traumatized patients (44 with sepsis and 184 without sepsis). To compare the results of trauma subjects with the data from the general population, a control group of 101 healthy persons was included in the study. Genotyping of TNFA (rs1800629 and rs361525), LTA (rs909253), TLR2 (rs3804099, rs4696480 and rs3804100), and TLR4 (rs4986790 and rs4986791) was performed for all patients within all three groups using the real-time PCR method. MutationTaster database and in silico software SIFT were used to predict the variant pathogenic effect. Results: Carriage of the G allele of the TNFA rs1800629 gene variant (OR 2.1, 95%CI 1.06-4.16) and T allele-carriage of the TLR4 rs4986791 genetic variant (OR 3.02, 95%CI 1.31-6.57) were associated with significantly higher risk of sepsis in trauma patients when compared to the general population prone to sepsis and traumatized patients without developing a sepsis, respectively. Of these two variants, only variant in TLR4 gene (rs4986791) has been labeled as disease causing by both the MutationTaster database and the in-silico software SIFT, which further supports the role of this variant in various pathologies including sepsis. For the remaining six variants no significant association with the susceptibility to sepsis was detected. Conclusions: Carriage of the G allele of the TNFA rs1800629 gene variant and T allele-carriage of the TLR4 rs4986791 genetic variant confer significant risk of posttraumatic sepsis. TLR4 gene variants (rs4986790 and rs4986791) has been labelled as disease causing.", publisher = "Elsevier Sci Ltd, Oxford", journal = "Injury-International Journal of the Care of the Injured", title = "Genetic variants in TNFA, LTA, TLR2 and TLR4 genes and risk of sepsis in patients with severe trauma: nested case-control study in a level-1 trauma centre in SERBIA", pages = "425-419", number = "3", volume = "52", doi = "10.1016/j.injury.2020.12.039" }
Đurić, O., Anđelković, M., Vreca, M., Skakić, A., Pavlović, S., Novaković, I., Jovanović, B., Skodrić-Trifunović, V.,& Marković-Denić, L.. (2021). Genetic variants in TNFA, LTA, TLR2 and TLR4 genes and risk of sepsis in patients with severe trauma: nested case-control study in a level-1 trauma centre in SERBIA. in Injury-International Journal of the Care of the Injured Elsevier Sci Ltd, Oxford., 52(3), 419-425. https://doi.org/10.1016/j.injury.2020.12.039
Đurić O, Anđelković M, Vreca M, Skakić A, Pavlović S, Novaković I, Jovanović B, Skodrić-Trifunović V, Marković-Denić L. Genetic variants in TNFA, LTA, TLR2 and TLR4 genes and risk of sepsis in patients with severe trauma: nested case-control study in a level-1 trauma centre in SERBIA. in Injury-International Journal of the Care of the Injured. 2021;52(3):419-425. doi:10.1016/j.injury.2020.12.039 .
Đurić, Olivera, Anđelković, Marina, Vreca, Misa, Skakić, Anita, Pavlović, Sonja, Novaković, Ivana, Jovanović, Bojan, Skodrić-Trifunović, Vesna, Marković-Denić, Ljiljana, "Genetic variants in TNFA, LTA, TLR2 and TLR4 genes and risk of sepsis in patients with severe trauma: nested case-control study in a level-1 trauma centre in SERBIA" in Injury-International Journal of the Care of the Injured, 52, no. 3 (2021):419-425, https://doi.org/10.1016/j.injury.2020.12.039 . .