Molecular, biochemical and immunological tumor diagnosis

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Molecular, biochemical and immunological tumor diagnosis (en)
Молекулске, биохемијске и имунолошке анализе у дијагностици тумора (sr)
Molekulske, biohemijske i imunološke analize u dijagnostici tumora (sr_RS)
Authors

Publications

Epidermal Growth Factor Receptor Gene in Non-Small-Cell Lung Cancer: The Importance of Promoter Polymorphism Investigation

Jurisić, Vladimir; Obradović, Jasmina; Pavlović, Sonja; Đorđević, Nataša

(Hindawi Ltd, London, 2018)

TY  - JOUR
AU  - Jurisić, Vladimir
AU  - Obradović, Jasmina
AU  - Pavlović, Sonja
AU  - Đorđević, Nataša
PY  - 2018
UR  - https://imagine.imgge.bg.ac.rs/handle/123456789/1151
AB  - Recently, epidermal growth factor receptor (EGFR) was a key molecule in investigation of lung cancer, and it was a target for a new therapeutic strategy, based on molecular analyses. In this review, we have summarized some issues considering the role of EGFR in lung cancer, its coding gene, and its promoter gene polymorphisms (SNPs) -216G/T and -191C/A in non-small-cell lung cancer (NSCLC). The position of the SNPs indicates their significant role in EGFR regulation. The accumulation of knowledge regarding SNPs lately suggests their significant and important role in the onset of carcinogenesis, the prediction of the onset of metastases, the response to therapy with TKI inhibitors, and the onset of toxic effects of the applied therapy. Based on this, we suggest further studies of the relationship of clinical significance to SNPs in patients with lung tumors.
PB  - Hindawi Ltd, London
T2  - Analytical Cellular Pathology
T1  - Epidermal Growth Factor Receptor Gene in Non-Small-Cell Lung Cancer: The Importance of Promoter Polymorphism Investigation
VL  - 2018
DO  - 10.1155/2018/6192187
ER  - 
@article{
author = "Jurisić, Vladimir and Obradović, Jasmina and Pavlović, Sonja and Đorđević, Nataša",
year = "2018",
abstract = "Recently, epidermal growth factor receptor (EGFR) was a key molecule in investigation of lung cancer, and it was a target for a new therapeutic strategy, based on molecular analyses. In this review, we have summarized some issues considering the role of EGFR in lung cancer, its coding gene, and its promoter gene polymorphisms (SNPs) -216G/T and -191C/A in non-small-cell lung cancer (NSCLC). The position of the SNPs indicates their significant role in EGFR regulation. The accumulation of knowledge regarding SNPs lately suggests their significant and important role in the onset of carcinogenesis, the prediction of the onset of metastases, the response to therapy with TKI inhibitors, and the onset of toxic effects of the applied therapy. Based on this, we suggest further studies of the relationship of clinical significance to SNPs in patients with lung tumors.",
publisher = "Hindawi Ltd, London",
journal = "Analytical Cellular Pathology",
title = "Epidermal Growth Factor Receptor Gene in Non-Small-Cell Lung Cancer: The Importance of Promoter Polymorphism Investigation",
volume = "2018",
doi = "10.1155/2018/6192187"
}
Jurisić, V., Obradović, J., Pavlović, S.,& Đorđević, N.. (2018). Epidermal Growth Factor Receptor Gene in Non-Small-Cell Lung Cancer: The Importance of Promoter Polymorphism Investigation. in Analytical Cellular Pathology
Hindawi Ltd, London., 2018.
https://doi.org/10.1155/2018/6192187
Jurisić V, Obradović J, Pavlović S, Đorđević N. Epidermal Growth Factor Receptor Gene in Non-Small-Cell Lung Cancer: The Importance of Promoter Polymorphism Investigation. in Analytical Cellular Pathology. 2018;2018.
doi:10.1155/2018/6192187 .
Jurisić, Vladimir, Obradović, Jasmina, Pavlović, Sonja, Đorđević, Nataša, "Epidermal Growth Factor Receptor Gene in Non-Small-Cell Lung Cancer: The Importance of Promoter Polymorphism Investigation" in Analytical Cellular Pathology, 2018 (2018),
https://doi.org/10.1155/2018/6192187 . .
48
4
48

Distribution of EGFR SNPs-191C/A and 181946G/A in patients with lung cancer depending on smoking status in the Republic of Srpska, Bosnia and Herzegovina

Elez-Burnjaković, Nikolina; Ugrin, Milena; Obradović, Jasmina; Miletić, Nataša; Racić, Maja; Kulić, Milan; Pavlović, Sonja; Jurisić, Vladimir

(Balkan Union of Oncology (B.U.ON.), 2018)

TY  - JOUR
AU  - Elez-Burnjaković, Nikolina
AU  - Ugrin, Milena
AU  - Obradović, Jasmina
AU  - Miletić, Nataša
AU  - Racić, Maja
AU  - Kulić, Milan
AU  - Pavlović, Sonja
AU  - Jurisić, Vladimir
PY  - 2018
UR  - https://imagine.imgge.bg.ac.rs/handle/123456789/1164
AB  - Purpose: To analyze the frequencies of two single nucleotide polymorphisms (SNPs) of EGFR gene, -191C/A and 181946G/A, among lung cancer patients from the Republic of Srpska, Bosnia and Hercegovina, as well as to assess the association of SNP genotypes with the cancer type and other demographic characteristics of patients, particularly with the smoking status. Methods: This study enrolled 41 lung cancer patients from the territory of Republic Srpska, Bosnia and Herzegovina. Detection EGFR SNPs was performed using PCR-RFLP methodology. PCR was performed on 2720 Thermal Cycler (Applied Biosystems, United States). PCR, as well as RFLP products, were detected by gel electrophoresis. SPSS-17 soft-ware (SPSS, Inc.) was used for statistical analyses. Results: There was significantly more male than female smokers in our cohort (p=0.006). In addition, the proportion of smokers was higher among patients with adenocarcinoma in comparison to patients with other lung cancer types p=0.044). Adenocarcinoma was less common in patients older than 64 years (p=0.035). The wild type homozygous genotype of both SNPs was the most frequent genotype in all the tested demographic groups. Using dominant genetic model for -191C/A SNP, we observed statistically significant association of -191CC genotype and adenocarcinoma (p=0.043) in the subgroup of patients younger than 64 years. Namely, patients younger than 64 years and carriers of -191CC genotype had higher risk (odds ratio/OR=9.6; 95% confidence interval/CI=0.8477 to 108.7214) for adenocarcinoma than the ones carrying -191CA or -191AA genotype. Conclusions: Patients younger than 64 years and carriers of -191CC genotype have significantly higher risk for adenocarcinoma than carriers of -191CA or -191AA genotype. Further studies on larger cohorts are necessary to evaluate -191C/A SNP as a potential biomarker.
PB  - Balkan Union of Oncology (B.U.ON.)
T2  - Journal of Buon
T1  - Distribution of EGFR SNPs-191C/A and 181946G/A in patients with lung cancer depending on smoking status in the Republic of Srpska, Bosnia and Herzegovina
EP  - 390
IS  - 2
SP  - 384
VL  - 23
UR  - https://hdl.handle.net/21.15107/rcub_imagine_1164
ER  - 
@article{
author = "Elez-Burnjaković, Nikolina and Ugrin, Milena and Obradović, Jasmina and Miletić, Nataša and Racić, Maja and Kulić, Milan and Pavlović, Sonja and Jurisić, Vladimir",
year = "2018",
abstract = "Purpose: To analyze the frequencies of two single nucleotide polymorphisms (SNPs) of EGFR gene, -191C/A and 181946G/A, among lung cancer patients from the Republic of Srpska, Bosnia and Hercegovina, as well as to assess the association of SNP genotypes with the cancer type and other demographic characteristics of patients, particularly with the smoking status. Methods: This study enrolled 41 lung cancer patients from the territory of Republic Srpska, Bosnia and Herzegovina. Detection EGFR SNPs was performed using PCR-RFLP methodology. PCR was performed on 2720 Thermal Cycler (Applied Biosystems, United States). PCR, as well as RFLP products, were detected by gel electrophoresis. SPSS-17 soft-ware (SPSS, Inc.) was used for statistical analyses. Results: There was significantly more male than female smokers in our cohort (p=0.006). In addition, the proportion of smokers was higher among patients with adenocarcinoma in comparison to patients with other lung cancer types p=0.044). Adenocarcinoma was less common in patients older than 64 years (p=0.035). The wild type homozygous genotype of both SNPs was the most frequent genotype in all the tested demographic groups. Using dominant genetic model for -191C/A SNP, we observed statistically significant association of -191CC genotype and adenocarcinoma (p=0.043) in the subgroup of patients younger than 64 years. Namely, patients younger than 64 years and carriers of -191CC genotype had higher risk (odds ratio/OR=9.6; 95% confidence interval/CI=0.8477 to 108.7214) for adenocarcinoma than the ones carrying -191CA or -191AA genotype. Conclusions: Patients younger than 64 years and carriers of -191CC genotype have significantly higher risk for adenocarcinoma than carriers of -191CA or -191AA genotype. Further studies on larger cohorts are necessary to evaluate -191C/A SNP as a potential biomarker.",
publisher = "Balkan Union of Oncology (B.U.ON.)",
journal = "Journal of Buon",
title = "Distribution of EGFR SNPs-191C/A and 181946G/A in patients with lung cancer depending on smoking status in the Republic of Srpska, Bosnia and Herzegovina",
pages = "390-384",
number = "2",
volume = "23",
url = "https://hdl.handle.net/21.15107/rcub_imagine_1164"
}
Elez-Burnjaković, N., Ugrin, M., Obradović, J., Miletić, N., Racić, M., Kulić, M., Pavlović, S.,& Jurisić, V.. (2018). Distribution of EGFR SNPs-191C/A and 181946G/A in patients with lung cancer depending on smoking status in the Republic of Srpska, Bosnia and Herzegovina. in Journal of Buon
Balkan Union of Oncology (B.U.ON.)., 23(2), 384-390.
https://hdl.handle.net/21.15107/rcub_imagine_1164
Elez-Burnjaković N, Ugrin M, Obradović J, Miletić N, Racić M, Kulić M, Pavlović S, Jurisić V. Distribution of EGFR SNPs-191C/A and 181946G/A in patients with lung cancer depending on smoking status in the Republic of Srpska, Bosnia and Herzegovina. in Journal of Buon. 2018;23(2):384-390.
https://hdl.handle.net/21.15107/rcub_imagine_1164 .
Elez-Burnjaković, Nikolina, Ugrin, Milena, Obradović, Jasmina, Miletić, Nataša, Racić, Maja, Kulić, Milan, Pavlović, Sonja, Jurisić, Vladimir, "Distribution of EGFR SNPs-191C/A and 181946G/A in patients with lung cancer depending on smoking status in the Republic of Srpska, Bosnia and Herzegovina" in Journal of Buon, 23, no. 2 (2018):384-390,
https://hdl.handle.net/21.15107/rcub_imagine_1164 .
2
7

Effects of DMSO, glycerol, betaine and their combinations in detecting single nucleotide polymorphisms of epidermal growth factor receptor (EGFR) gene promoter sequence in non-small-cell lung cancer (NSCLC) patients

Jurisić, Vladimir; Obradović, Jasmina; Tošić, Nataša; Pavlović, Sonja; Kulić, Milan; Đorđević, Nataša

(Elsevier, Amsterdam, 2016)

TY  - JOUR
AU  - Jurisić, Vladimir
AU  - Obradović, Jasmina
AU  - Tošić, Nataša
AU  - Pavlović, Sonja
AU  - Kulić, Milan
AU  - Đorđević, Nataša
PY  - 2016
UR  - https://imagine.imgge.bg.ac.rs/handle/123456789/903
AB  - The aim of the study was to examine the effects of frequently used polymerase chain reaction (PCR) additives DMSO, glycerol and betaine on amplification of GC-rich epidermal growth factor receptor (EGFR) gene promoter region, in order to detect the presence of -216G  gt  T and -191C  gt  A gene variations in non-small-cell lung cancer (NSCLC) patients. PCR products and restriction fragments were detected by electrophoresis on 8% polyacrylamide gel and 3% agarose gel. Our analysis shows that single used additives including DMSO in concentration of 7% and 10%, glycerol in concentration of 10%, 15% and 20%, as well as betaine in concentration of 1 M, 1.5 M and 2 M significantly enhanced the yield and specificity of PCR reaction. In addition, the combination of 10% DMSO with 15% glycerol has shown positive effects, whereas other analyzed combinations of additives failed to amplify the EGFR promoter region.
PB  - Elsevier, Amsterdam
T2  - Journal of Pharmaceutical and Biomedical Analysis
T1  - Effects of DMSO, glycerol, betaine and their combinations in detecting single nucleotide polymorphisms of epidermal growth factor receptor (EGFR) gene promoter sequence in non-small-cell lung cancer (NSCLC) patients
EP  - 279
SP  - 275
VL  - 128
DO  - 10.1016/j.jpba.2016.05.010
ER  - 
@article{
author = "Jurisić, Vladimir and Obradović, Jasmina and Tošić, Nataša and Pavlović, Sonja and Kulić, Milan and Đorđević, Nataša",
year = "2016",
abstract = "The aim of the study was to examine the effects of frequently used polymerase chain reaction (PCR) additives DMSO, glycerol and betaine on amplification of GC-rich epidermal growth factor receptor (EGFR) gene promoter region, in order to detect the presence of -216G  gt  T and -191C  gt  A gene variations in non-small-cell lung cancer (NSCLC) patients. PCR products and restriction fragments were detected by electrophoresis on 8% polyacrylamide gel and 3% agarose gel. Our analysis shows that single used additives including DMSO in concentration of 7% and 10%, glycerol in concentration of 10%, 15% and 20%, as well as betaine in concentration of 1 M, 1.5 M and 2 M significantly enhanced the yield and specificity of PCR reaction. In addition, the combination of 10% DMSO with 15% glycerol has shown positive effects, whereas other analyzed combinations of additives failed to amplify the EGFR promoter region.",
publisher = "Elsevier, Amsterdam",
journal = "Journal of Pharmaceutical and Biomedical Analysis",
title = "Effects of DMSO, glycerol, betaine and their combinations in detecting single nucleotide polymorphisms of epidermal growth factor receptor (EGFR) gene promoter sequence in non-small-cell lung cancer (NSCLC) patients",
pages = "279-275",
volume = "128",
doi = "10.1016/j.jpba.2016.05.010"
}
Jurisić, V., Obradović, J., Tošić, N., Pavlović, S., Kulić, M.,& Đorđević, N.. (2016). Effects of DMSO, glycerol, betaine and their combinations in detecting single nucleotide polymorphisms of epidermal growth factor receptor (EGFR) gene promoter sequence in non-small-cell lung cancer (NSCLC) patients. in Journal of Pharmaceutical and Biomedical Analysis
Elsevier, Amsterdam., 128, 275-279.
https://doi.org/10.1016/j.jpba.2016.05.010
Jurisić V, Obradović J, Tošić N, Pavlović S, Kulić M, Đorđević N. Effects of DMSO, glycerol, betaine and their combinations in detecting single nucleotide polymorphisms of epidermal growth factor receptor (EGFR) gene promoter sequence in non-small-cell lung cancer (NSCLC) patients. in Journal of Pharmaceutical and Biomedical Analysis. 2016;128:275-279.
doi:10.1016/j.jpba.2016.05.010 .
Jurisić, Vladimir, Obradović, Jasmina, Tošić, Nataša, Pavlović, Sonja, Kulić, Milan, Đorđević, Nataša, "Effects of DMSO, glycerol, betaine and their combinations in detecting single nucleotide polymorphisms of epidermal growth factor receptor (EGFR) gene promoter sequence in non-small-cell lung cancer (NSCLC) patients" in Journal of Pharmaceutical and Biomedical Analysis, 128 (2016):275-279,
https://doi.org/10.1016/j.jpba.2016.05.010 . .
1
7
1
6

Frequencies of EGFR single nucleotide polymorphisms in non-small cell lung cancer patients and healthy individuals in the Republic of Serbia: a preliminary study

Obradović, Jasmina; Đorđević, Nataša; Tošić, Nataša; Mrdjanović, Jasminka; Stanković, Biljana; Stanić, Jelena; Zarić, Bojan; Perin, Branislav; Pavlović, Sonja; Jurisić, Vladimir

(Sage Publications Ltd, London, 2016)

TY  - JOUR
AU  - Obradović, Jasmina
AU  - Đorđević, Nataša
AU  - Tošić, Nataša
AU  - Mrdjanović, Jasminka
AU  - Stanković, Biljana
AU  - Stanić, Jelena
AU  - Zarić, Bojan
AU  - Perin, Branislav
AU  - Pavlović, Sonja
AU  - Jurisić, Vladimir
PY  - 2016
UR  - https://imagine.imgge.bg.ac.rs/handle/123456789/902
AB  - The purpose of this study was to determine the frequencies of EGFR -216G  gt  T, -191C  gt  A, and 181946C  gt  T in Serbian non-small cell lung cancer (NSCLC) patients, as well as to compare it with healthy individuals, in order to assess their potential importance for lung cancer in Serbia. The study involved 56 NSCLC patients and 53 unrelated healthy volunteers, and genotyping was performed on DNA samples obtained from formalin-fixed paraffin-embedded lung tumor tissue and blood, respectively. This was the first time to show genotype frequencies of those single nucleotide polymorphisms for this study group from the territory of the Republic of Serbia. There was very strong evidence of association between age and death due to lung cancer (Pearson chi-square = 43.439, df = 2, p  lt  0,001), as well as between ever smoking and death due to lung cancer (Pearson chi-square = 31.727, df = 1, p  lt  0.001). When dominant genetic model (GG vs. GT+TT) was used for -216G  gt  T, we have found significant association (p = 0.012) between -216GG genotype and NSCLC patients within smokers' subgroup. So, carriers of -216GG genotype had higher risk (OR = 4.33, 95 % CI = 1.324-14.179) than noncarriers (GT and TT) for developing non-small cell lung cancer in our patients.
PB  - Sage Publications Ltd, London
T2  - Tumor Biology
T1  - Frequencies of EGFR single nucleotide polymorphisms in non-small cell lung cancer patients and healthy individuals in the Republic of Serbia: a preliminary study
EP  - 10486
IS  - 8
SP  - 10479
VL  - 37
DO  - 10.1007/s13277-016-4930-4
ER  - 
@article{
author = "Obradović, Jasmina and Đorđević, Nataša and Tošić, Nataša and Mrdjanović, Jasminka and Stanković, Biljana and Stanić, Jelena and Zarić, Bojan and Perin, Branislav and Pavlović, Sonja and Jurisić, Vladimir",
year = "2016",
abstract = "The purpose of this study was to determine the frequencies of EGFR -216G  gt  T, -191C  gt  A, and 181946C  gt  T in Serbian non-small cell lung cancer (NSCLC) patients, as well as to compare it with healthy individuals, in order to assess their potential importance for lung cancer in Serbia. The study involved 56 NSCLC patients and 53 unrelated healthy volunteers, and genotyping was performed on DNA samples obtained from formalin-fixed paraffin-embedded lung tumor tissue and blood, respectively. This was the first time to show genotype frequencies of those single nucleotide polymorphisms for this study group from the territory of the Republic of Serbia. There was very strong evidence of association between age and death due to lung cancer (Pearson chi-square = 43.439, df = 2, p  lt  0,001), as well as between ever smoking and death due to lung cancer (Pearson chi-square = 31.727, df = 1, p  lt  0.001). When dominant genetic model (GG vs. GT+TT) was used for -216G  gt  T, we have found significant association (p = 0.012) between -216GG genotype and NSCLC patients within smokers' subgroup. So, carriers of -216GG genotype had higher risk (OR = 4.33, 95 % CI = 1.324-14.179) than noncarriers (GT and TT) for developing non-small cell lung cancer in our patients.",
publisher = "Sage Publications Ltd, London",
journal = "Tumor Biology",
title = "Frequencies of EGFR single nucleotide polymorphisms in non-small cell lung cancer patients and healthy individuals in the Republic of Serbia: a preliminary study",
pages = "10486-10479",
number = "8",
volume = "37",
doi = "10.1007/s13277-016-4930-4"
}
Obradović, J., Đorđević, N., Tošić, N., Mrdjanović, J., Stanković, B., Stanić, J., Zarić, B., Perin, B., Pavlović, S.,& Jurisić, V.. (2016). Frequencies of EGFR single nucleotide polymorphisms in non-small cell lung cancer patients and healthy individuals in the Republic of Serbia: a preliminary study. in Tumor Biology
Sage Publications Ltd, London., 37(8), 10479-10486.
https://doi.org/10.1007/s13277-016-4930-4
Obradović J, Đorđević N, Tošić N, Mrdjanović J, Stanković B, Stanić J, Zarić B, Perin B, Pavlović S, Jurisić V. Frequencies of EGFR single nucleotide polymorphisms in non-small cell lung cancer patients and healthy individuals in the Republic of Serbia: a preliminary study. in Tumor Biology. 2016;37(8):10479-10486.
doi:10.1007/s13277-016-4930-4 .
Obradović, Jasmina, Đorđević, Nataša, Tošić, Nataša, Mrdjanović, Jasminka, Stanković, Biljana, Stanić, Jelena, Zarić, Bojan, Perin, Branislav, Pavlović, Sonja, Jurisić, Vladimir, "Frequencies of EGFR single nucleotide polymorphisms in non-small cell lung cancer patients and healthy individuals in the Republic of Serbia: a preliminary study" in Tumor Biology, 37, no. 8 (2016):10479-10486,
https://doi.org/10.1007/s13277-016-4930-4 . .
13
6
13

Possibility of transformation of primary myelofibrosis to ALL without JAK2V617F mutation

Jurišić, Vladimir; Pavlović, Sonja; Čolović, Nataša; Colović, Milica

(Humana Press Inc, Totowa, 2013)

TY  - JOUR
AU  - Jurišić, Vladimir
AU  - Pavlović, Sonja
AU  - Čolović, Nataša
AU  - Colović, Milica
PY  - 2013
UR  - https://imagine.imgge.bg.ac.rs/handle/123456789/642
AB  - To the editor,
In this letter, we wish to point out the possibility of
transformation of myelofibrosis in acute lymphocytic leukemia without the presence of JAK2V617F mutation.
Myeloproliferative neoplasms (MPN) are hematologic
malignant diseases characterized by a clonal proliferation
of one or several lineages [1]. They represent a phenotypically diverse group of chronic myeloid malignancies
that are characterized by the presence of clonal hematopoiesis and an excessive production of terminally differentiated myeloid blood cells. Typically, they include four
main clinical entities: polycythemia vera (PV), essential
thrombocythemia (ET), primary myelofibrosis (PMF), and
chronic myeloid leukemia (CML). PV, ET, and PMF are
usually subcategorized as bcr-abl-negative MPN. However,
sporadic cases of bcr-abl-positive patients with transformation of primary myelofibrosis were reported but without
JAK2V617F mutation [2].
The prevalence of JAK2V617F mutation [3] differs
between various variants of MF with the higher detection
rate for patients with post-PV MF (91 %) if compared to
PMF (45 %) and post-ET MF (39 %). Some works
emphasize the importance of the predictive role of
JAK2V617F mutation for this transformation. JAK2V617F
mutation is also discussed in myeloproliferative disease and
primary myelofibrosis as well, in respect to clinical prognosis and transformation [4, 5]. The JAK2V617F mutation
was reported to found positive in 7 out of 17 (64 %) analyzed
patients with PMF and with transformation to leukemia. The
risk of transformation to acute leukemia in investigated
patients was around 31 % in JAK-2 positive, but several
studies also indicated possibility of transformation in
JAK-2-negative PMF. However, majority of patients were
transformed to acute myeloid leukemia. We previously
reported possibility of transformation of PMF to acute
lymphocytic leukemia (ALL) [2] and only an additional
case in literature reported transformation of refractory
anemia with ring sideroblasts (RARS) to ALL [4] with
20q- cytogenetic. Patients with PV had also possibility to
transform to PMF, frequently regarding to JAK-2 mutation.
However, no difference in the frequency of transformation
PV patients to acute myeloid leukemia was observed
between the JAK2 positive and JAK2 negative [4].
Here, we want to emphasize the possibility thatPMF can
transform into ALL, probably regarding molecular disturbance in immature hematopoietic precursor cell. Briefly, we
previously reported that patient with 20q- cytogenetic anomaly, which is usually a favorable cytogenetic prognostic factor,
can transform to ALL with Philadelphia-positive finding, but
without JAK2V617F mutation, and with fatal outcome after
10 months [2] pointing out the other factors that can lead to
transformation of PMF into ALL.
Since leukemogenesis is a complex process caused by one
or multiple gene alterations, which perturbs the regulation of
development and maturation of the multipotent hemopoietic
progenitor cells gradually leading to acute leukemia, here we
want to point out that they may have other molecular and
cytogenetic changes except JAK2V617F mutation, which can
be important during transformation. We suggested the continuation of the examination of genetic disturbances in
order to understand a very complex process of transformation
in unstable karyotypes in pre-leukemic conditions
PB  - Humana Press Inc, Totowa
T2  - Medical Oncology
T1  - Possibility of transformation of primary myelofibrosis to ALL without JAK2V617F mutation
IS  - 1
VL  - 30
DO  - 10.1007/s12032-012-0398-2
ER  - 
@article{
author = "Jurišić, Vladimir and Pavlović, Sonja and Čolović, Nataša and Colović, Milica",
year = "2013",
abstract = "To the editor,
In this letter, we wish to point out the possibility of
transformation of myelofibrosis in acute lymphocytic leukemia without the presence of JAK2V617F mutation.
Myeloproliferative neoplasms (MPN) are hematologic
malignant diseases characterized by a clonal proliferation
of one or several lineages [1]. They represent a phenotypically diverse group of chronic myeloid malignancies
that are characterized by the presence of clonal hematopoiesis and an excessive production of terminally differentiated myeloid blood cells. Typically, they include four
main clinical entities: polycythemia vera (PV), essential
thrombocythemia (ET), primary myelofibrosis (PMF), and
chronic myeloid leukemia (CML). PV, ET, and PMF are
usually subcategorized as bcr-abl-negative MPN. However,
sporadic cases of bcr-abl-positive patients with transformation of primary myelofibrosis were reported but without
JAK2V617F mutation [2].
The prevalence of JAK2V617F mutation [3] differs
between various variants of MF with the higher detection
rate for patients with post-PV MF (91 %) if compared to
PMF (45 %) and post-ET MF (39 %). Some works
emphasize the importance of the predictive role of
JAK2V617F mutation for this transformation. JAK2V617F
mutation is also discussed in myeloproliferative disease and
primary myelofibrosis as well, in respect to clinical prognosis and transformation [4, 5]. The JAK2V617F mutation
was reported to found positive in 7 out of 17 (64 %) analyzed
patients with PMF and with transformation to leukemia. The
risk of transformation to acute leukemia in investigated
patients was around 31 % in JAK-2 positive, but several
studies also indicated possibility of transformation in
JAK-2-negative PMF. However, majority of patients were
transformed to acute myeloid leukemia. We previously
reported possibility of transformation of PMF to acute
lymphocytic leukemia (ALL) [2] and only an additional
case in literature reported transformation of refractory
anemia with ring sideroblasts (RARS) to ALL [4] with
20q- cytogenetic. Patients with PV had also possibility to
transform to PMF, frequently regarding to JAK-2 mutation.
However, no difference in the frequency of transformation
PV patients to acute myeloid leukemia was observed
between the JAK2 positive and JAK2 negative [4].
Here, we want to emphasize the possibility thatPMF can
transform into ALL, probably regarding molecular disturbance in immature hematopoietic precursor cell. Briefly, we
previously reported that patient with 20q- cytogenetic anomaly, which is usually a favorable cytogenetic prognostic factor,
can transform to ALL with Philadelphia-positive finding, but
without JAK2V617F mutation, and with fatal outcome after
10 months [2] pointing out the other factors that can lead to
transformation of PMF into ALL.
Since leukemogenesis is a complex process caused by one
or multiple gene alterations, which perturbs the regulation of
development and maturation of the multipotent hemopoietic
progenitor cells gradually leading to acute leukemia, here we
want to point out that they may have other molecular and
cytogenetic changes except JAK2V617F mutation, which can
be important during transformation. We suggested the continuation of the examination of genetic disturbances in
order to understand a very complex process of transformation
in unstable karyotypes in pre-leukemic conditions",
publisher = "Humana Press Inc, Totowa",
journal = "Medical Oncology",
title = "Possibility of transformation of primary myelofibrosis to ALL without JAK2V617F mutation",
number = "1",
volume = "30",
doi = "10.1007/s12032-012-0398-2"
}
Jurišić, V., Pavlović, S., Čolović, N.,& Colović, M.. (2013). Possibility of transformation of primary myelofibrosis to ALL without JAK2V617F mutation. in Medical Oncology
Humana Press Inc, Totowa., 30(1).
https://doi.org/10.1007/s12032-012-0398-2
Jurišić V, Pavlović S, Čolović N, Colović M. Possibility of transformation of primary myelofibrosis to ALL without JAK2V617F mutation. in Medical Oncology. 2013;30(1).
doi:10.1007/s12032-012-0398-2 .
Jurišić, Vladimir, Pavlović, Sonja, Čolović, Nataša, Colović, Milica, "Possibility of transformation of primary myelofibrosis to ALL without JAK2V617F mutation" in Medical Oncology, 30, no. 1 (2013),
https://doi.org/10.1007/s12032-012-0398-2 . .

Expression of Bcl2L12 in chronic lymphocytic leukemia patients: association with clinical and molecular prognostic markers

Karan-Đurašević, Teodora; Palibrk, Vuk; Zukić, Branka; Spasovski, Vesna; Marjanović, Irena; Colović, Milica; Čolović, Nataša; Jurisić, Vladimir; Scorilas, Andreas; Pavlović, Sonja; Tošić, Nataša

(Humana Press Inc, Totowa, 2013)

TY  - JOUR
AU  - Karan-Đurašević, Teodora
AU  - Palibrk, Vuk
AU  - Zukić, Branka
AU  - Spasovski, Vesna
AU  - Marjanović, Irena
AU  - Colović, Milica
AU  - Čolović, Nataša
AU  - Jurisić, Vladimir
AU  - Scorilas, Andreas
AU  - Pavlović, Sonja
AU  - Tošić, Nataša
PY  - 2013
UR  - https://imagine.imgge.bg.ac.rs/handle/123456789/641
AB  - Dysregulation of apoptosis is a distinctive feature of chronic lymphocytic leukemia (CLL), although a unique mechanism underlying apoptosis resistance of CLL B lymphocytes has not been identified yet. Aberrant expression as well as genetic and epigenetic alterations of numerous genes involved in different pathways of apoptosis regulation has been described in CLL. Here, we report the expression analysis of Bcl2L12 (Bcl2-like 12), a novel apoptotic gene belonging to Bcl2 family, in 58 Serbian CLL patients. Quantitative reverse-transcriptase polymerase chain reaction (qRT-PCR) analysis revealed a significant overexpression of Bcl2L12 mRNA in CLL samples compared to non-leukemic samples, implying its role in the pathogenesis of the disease. Receiver operating characteristic (ROC) analysis showed that Bcl2L12 expression efficiently discriminates CLL cases from healthy controls. However, relatively homogenous Bcl2L12 mRNA expression among patients did not reflect their clinical characteristics (with the exception of lactate dehydrogenase status and time from diagnosis to treatment) and failed to show association with the most informative prognostic markers, namely the mutational status of rearranged immunoglobulin heavy chain variable region genes, CD38 and lipoprotein lipase gene (LPL) expression.
PB  - Humana Press Inc, Totowa
T2  - Medical Oncology
T1  - Expression of Bcl2L12 in chronic lymphocytic leukemia patients: association with clinical and molecular prognostic markers
IS  - 1
VL  - 30
DO  - 10.1007/s12032-012-0405-7
ER  - 
@article{
author = "Karan-Đurašević, Teodora and Palibrk, Vuk and Zukić, Branka and Spasovski, Vesna and Marjanović, Irena and Colović, Milica and Čolović, Nataša and Jurisić, Vladimir and Scorilas, Andreas and Pavlović, Sonja and Tošić, Nataša",
year = "2013",
abstract = "Dysregulation of apoptosis is a distinctive feature of chronic lymphocytic leukemia (CLL), although a unique mechanism underlying apoptosis resistance of CLL B lymphocytes has not been identified yet. Aberrant expression as well as genetic and epigenetic alterations of numerous genes involved in different pathways of apoptosis regulation has been described in CLL. Here, we report the expression analysis of Bcl2L12 (Bcl2-like 12), a novel apoptotic gene belonging to Bcl2 family, in 58 Serbian CLL patients. Quantitative reverse-transcriptase polymerase chain reaction (qRT-PCR) analysis revealed a significant overexpression of Bcl2L12 mRNA in CLL samples compared to non-leukemic samples, implying its role in the pathogenesis of the disease. Receiver operating characteristic (ROC) analysis showed that Bcl2L12 expression efficiently discriminates CLL cases from healthy controls. However, relatively homogenous Bcl2L12 mRNA expression among patients did not reflect their clinical characteristics (with the exception of lactate dehydrogenase status and time from diagnosis to treatment) and failed to show association with the most informative prognostic markers, namely the mutational status of rearranged immunoglobulin heavy chain variable region genes, CD38 and lipoprotein lipase gene (LPL) expression.",
publisher = "Humana Press Inc, Totowa",
journal = "Medical Oncology",
title = "Expression of Bcl2L12 in chronic lymphocytic leukemia patients: association with clinical and molecular prognostic markers",
number = "1",
volume = "30",
doi = "10.1007/s12032-012-0405-7"
}
Karan-Đurašević, T., Palibrk, V., Zukić, B., Spasovski, V., Marjanović, I., Colović, M., Čolović, N., Jurisić, V., Scorilas, A., Pavlović, S.,& Tošić, N.. (2013). Expression of Bcl2L12 in chronic lymphocytic leukemia patients: association with clinical and molecular prognostic markers. in Medical Oncology
Humana Press Inc, Totowa., 30(1).
https://doi.org/10.1007/s12032-012-0405-7
Karan-Đurašević T, Palibrk V, Zukić B, Spasovski V, Marjanović I, Colović M, Čolović N, Jurisić V, Scorilas A, Pavlović S, Tošić N. Expression of Bcl2L12 in chronic lymphocytic leukemia patients: association with clinical and molecular prognostic markers. in Medical Oncology. 2013;30(1).
doi:10.1007/s12032-012-0405-7 .
Karan-Đurašević, Teodora, Palibrk, Vuk, Zukić, Branka, Spasovski, Vesna, Marjanović, Irena, Colović, Milica, Čolović, Nataša, Jurisić, Vladimir, Scorilas, Andreas, Pavlović, Sonja, Tošić, Nataša, "Expression of Bcl2L12 in chronic lymphocytic leukemia patients: association with clinical and molecular prognostic markers" in Medical Oncology, 30, no. 1 (2013),
https://doi.org/10.1007/s12032-012-0405-7 . .
16
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Optimization of PCR Conditions for Amplification of GC-Rich EGFR Promoter Sequence

Obradović, Jasmina; Jurisić, Vladimir; Tošić, Nataša; Mrdjanović, Jasminka; Perin, Branislav; Pavlović, Sonja; Đorđević, Nataša

(Wiley, Hoboken, 2013)

TY  - JOUR
AU  - Obradović, Jasmina
AU  - Jurisić, Vladimir
AU  - Tošić, Nataša
AU  - Mrdjanović, Jasminka
AU  - Perin, Branislav
AU  - Pavlović, Sonja
AU  - Đorđević, Nataša
PY  - 2013
UR  - https://imagine.imgge.bg.ac.rs/handle/123456789/666
AB  - BackgroundPolymerase chain reaction (PCR) is an extremely sensitive method that often demands optimization, especially when difficult templates need to be amplified. The aim of the present study was to optimize the PCR conditions for amplification of the epidermal growth factor receptor (EGFR) promoter sequence featuring an extremely high guanine-cytosine (GC) content in order to detect single nucleotide polymorphisms -216G gt T and -191C gt A. MethodsGenomic DNA used for amplification was extracted from formalin-fixed paraffin-embedded lung tumor tissue and PCR products were detected by agarose gel electrophoresis. ResultsResults showed that addition of 5% dimethyl sulfoxide (DMSO), as well as DNA concentration in PCR reaction of at least 2 g/ml, were necessary for successful amplification. Due to high GC content, optimal annealing temperature was 7 degrees C higher than calculated, while adequate MgCl2 concentration ranged from 1.5 to 2.0 mM. ConclusionIn conclusion, EGFR promoter region is a difficult PCR target, but it could be amplified after optimization of MgCl2 concentration and annealing temperature in the presence of DMSO and the DNA template of acceptable concentration.
PB  - Wiley, Hoboken
T2  - Journal of Clinical Laboratory Analysis
T1  - Optimization of PCR Conditions for Amplification of GC-Rich EGFR Promoter Sequence
EP  - 493
IS  - 6
SP  - 487
VL  - 27
DO  - 10.1002/jcla.21632
ER  - 
@article{
author = "Obradović, Jasmina and Jurisić, Vladimir and Tošić, Nataša and Mrdjanović, Jasminka and Perin, Branislav and Pavlović, Sonja and Đorđević, Nataša",
year = "2013",
abstract = "BackgroundPolymerase chain reaction (PCR) is an extremely sensitive method that often demands optimization, especially when difficult templates need to be amplified. The aim of the present study was to optimize the PCR conditions for amplification of the epidermal growth factor receptor (EGFR) promoter sequence featuring an extremely high guanine-cytosine (GC) content in order to detect single nucleotide polymorphisms -216G gt T and -191C gt A. MethodsGenomic DNA used for amplification was extracted from formalin-fixed paraffin-embedded lung tumor tissue and PCR products were detected by agarose gel electrophoresis. ResultsResults showed that addition of 5% dimethyl sulfoxide (DMSO), as well as DNA concentration in PCR reaction of at least 2 g/ml, were necessary for successful amplification. Due to high GC content, optimal annealing temperature was 7 degrees C higher than calculated, while adequate MgCl2 concentration ranged from 1.5 to 2.0 mM. ConclusionIn conclusion, EGFR promoter region is a difficult PCR target, but it could be amplified after optimization of MgCl2 concentration and annealing temperature in the presence of DMSO and the DNA template of acceptable concentration.",
publisher = "Wiley, Hoboken",
journal = "Journal of Clinical Laboratory Analysis",
title = "Optimization of PCR Conditions for Amplification of GC-Rich EGFR Promoter Sequence",
pages = "493-487",
number = "6",
volume = "27",
doi = "10.1002/jcla.21632"
}
Obradović, J., Jurisić, V., Tošić, N., Mrdjanović, J., Perin, B., Pavlović, S.,& Đorđević, N.. (2013). Optimization of PCR Conditions for Amplification of GC-Rich EGFR Promoter Sequence. in Journal of Clinical Laboratory Analysis
Wiley, Hoboken., 27(6), 487-493.
https://doi.org/10.1002/jcla.21632
Obradović J, Jurisić V, Tošić N, Mrdjanović J, Perin B, Pavlović S, Đorđević N. Optimization of PCR Conditions for Amplification of GC-Rich EGFR Promoter Sequence. in Journal of Clinical Laboratory Analysis. 2013;27(6):487-493.
doi:10.1002/jcla.21632 .
Obradović, Jasmina, Jurisić, Vladimir, Tošić, Nataša, Mrdjanović, Jasminka, Perin, Branislav, Pavlović, Sonja, Đorđević, Nataša, "Optimization of PCR Conditions for Amplification of GC-Rich EGFR Promoter Sequence" in Journal of Clinical Laboratory Analysis, 27, no. 6 (2013):487-493,
https://doi.org/10.1002/jcla.21632 . .
1
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Acute Myeloid Leukemia Associated With Near-Tetraploid Karyotype and Mutations in the FLT3 Gene

Jurisić, Vladimir; Pavlović, Sonja; Čolović, Nataša; Đorđević, Vesna; Janković, Gradimir; Colović, Milica

(Amer Soc Clinical Pathology, Chicago, 2011)

TY  - JOUR
AU  - Jurisić, Vladimir
AU  - Pavlović, Sonja
AU  - Čolović, Nataša
AU  - Đorđević, Vesna
AU  - Janković, Gradimir
AU  - Colović, Milica
PY  - 2011
UR  - https://imagine.imgge.bg.ac.rs/handle/123456789/525
AB  - Tetraploidy and near-tetraploidy are rare in acute myeloid leukemia (AML), contrary to other hematological disease. In this paper we describe a case of a 52-year-old male with AML associated with tetraploidy, mutation in tyrosine kinase receptor FLT3, and very short survival. At presentation maculopapular rash with crustae, lymphadenopathy, and hepatosplenomegaly was diagnosed. The blasts comprised 80% of marrow nucleated cells (POX negative and PAS finely granular positive). Immunophenotyping done on marrow cells was (CD34, HLA DR, CD14, CD64, CD33, CD11b, and CD15) and correlated with the acute monoblastic leukemia. Detection of FLT3 mutation was done by polymerase chain reaction (PCR). Cytogenetic analysis show: 85-93. XXYY,inc(cp5)/46,XY. Based on these considerations, we suggest the detection of FLT3 mutations as a diagnostic procedure for all AML patients.
PB  - Amer Soc Clinical Pathology, Chicago
T2  - Laboratory Medicine
T1  - Acute Myeloid Leukemia Associated With Near-Tetraploid Karyotype and Mutations in the FLT3 Gene
EP  - 543
IS  - 9
SP  - 540
VL  - 42
DO  - 10.1309/LM6E0CQQPOKXXG4E
ER  - 
@article{
author = "Jurisić, Vladimir and Pavlović, Sonja and Čolović, Nataša and Đorđević, Vesna and Janković, Gradimir and Colović, Milica",
year = "2011",
abstract = "Tetraploidy and near-tetraploidy are rare in acute myeloid leukemia (AML), contrary to other hematological disease. In this paper we describe a case of a 52-year-old male with AML associated with tetraploidy, mutation in tyrosine kinase receptor FLT3, and very short survival. At presentation maculopapular rash with crustae, lymphadenopathy, and hepatosplenomegaly was diagnosed. The blasts comprised 80% of marrow nucleated cells (POX negative and PAS finely granular positive). Immunophenotyping done on marrow cells was (CD34, HLA DR, CD14, CD64, CD33, CD11b, and CD15) and correlated with the acute monoblastic leukemia. Detection of FLT3 mutation was done by polymerase chain reaction (PCR). Cytogenetic analysis show: 85-93. XXYY,inc(cp5)/46,XY. Based on these considerations, we suggest the detection of FLT3 mutations as a diagnostic procedure for all AML patients.",
publisher = "Amer Soc Clinical Pathology, Chicago",
journal = "Laboratory Medicine",
title = "Acute Myeloid Leukemia Associated With Near-Tetraploid Karyotype and Mutations in the FLT3 Gene",
pages = "543-540",
number = "9",
volume = "42",
doi = "10.1309/LM6E0CQQPOKXXG4E"
}
Jurisić, V., Pavlović, S., Čolović, N., Đorđević, V., Janković, G.,& Colović, M.. (2011). Acute Myeloid Leukemia Associated With Near-Tetraploid Karyotype and Mutations in the FLT3 Gene. in Laboratory Medicine
Amer Soc Clinical Pathology, Chicago., 42(9), 540-543.
https://doi.org/10.1309/LM6E0CQQPOKXXG4E
Jurisić V, Pavlović S, Čolović N, Đorđević V, Janković G, Colović M. Acute Myeloid Leukemia Associated With Near-Tetraploid Karyotype and Mutations in the FLT3 Gene. in Laboratory Medicine. 2011;42(9):540-543.
doi:10.1309/LM6E0CQQPOKXXG4E .
Jurisić, Vladimir, Pavlović, Sonja, Čolović, Nataša, Đorđević, Vesna, Janković, Gradimir, Colović, Milica, "Acute Myeloid Leukemia Associated With Near-Tetraploid Karyotype and Mutations in the FLT3 Gene" in Laboratory Medicine, 42, no. 9 (2011):540-543,
https://doi.org/10.1309/LM6E0CQQPOKXXG4E . .
1
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