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What is life?’’: Open quantum systems approach
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
Recently the quantum formalism and methodology started to be applied to modeling
of information processing in biosystems, mainly to the process of decision making and
psychological behavior (but some applications to ...
Multiomics Integration by Non-Negative Tri-Matrix Factorization Reveals New Target Genes in Parkinson’s Disease
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
Parkinson’s disease (PD) is the second most common neurodegenerative disease which is
characterized by neuronal loss of dopaminergic neurons (mDA) in the substantia nigra. The
underlying complexity of the disease and ...
Using AI/ML to transform molecular biology databases
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
We are living through a revolution in AI approaches, which is transforming molecular
biology and computational biology. I will discuss how the advent of high accuracy structural
models has made a large impact in our ...
Exploiting the linear organisation of omics network embedding spaces
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
We are increasingly accumulating large-scale biological omics data that describe different
aspects of cellular functioning. These datasets are typically modelled and analyzed as
networks. To ease the downstream analyses, ...
The complete solution and interpretation algorithms for large field-of-view and high-resolution spatial transcriptomics
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
The large field-of-view and high-resolution spatial transcriptomics technology can
reveal and answer scientific questions that cannot be discovered or elucidated by lowresolution
spatial transcriptomics. Obtaining ...
Translating Bioinformatics Back To Healthcare: Facilitating the use of Artificial Intelligence at UW Medicine
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
It is an opportune time to be engaged in the research and application of informatics
in biomedicine. The increased use of electronic and personal health records and
personal mobile devices is creating many opportunities ...
Stereo-seq: Large Field of View-Spatially Resolved Transcriptomics at Nanoscale Resolution
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
STOmics’ Stereo-seq technology is a world-leading unbiased whole transcriptome spatial
omics platform that combines nanoscale resolution with the centimeter-level field of
view. The Stereo-seq chip comprises billions of ...
De novo Genome Assembly of Sweet Chestnut (Castanea sativa Mill.) Insights into the Molecular Basis of its Nutritional Properties
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
The Sweet Chestnut (Castanea sativa Mill.) is a tree species that holds significant economic
importance and naturally spreads throughout central-southern Europe and Asia Minor. Its
highly nutritious nuts have a unique ...
Transcriptomic profiling of white blood cells reveals new insights into the molecular mechanisms of thalidomide in children with inflammatory bowel disease
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
Thalidomide has emerged as an effective immunomodulator in the treatment of pediatric
patients with inflammatory bowel disease (IBD) refractory to standard therapies. Cereblon,
a component of E3 protein ligase complex ...
Efficient bioinformatics workflow for de novo transcriptome assembly of Pelargonium zonale
(Belgrade : Institute of molecular genetics and genetic engineering, 2023)
Variegated Pelargonium zonale is a widely cultivated ornamental plant characterized by
green, photosynthetically active tissue (GL) and white, non-photosynthetic tissue (WL).
The aim of this study was to investigate the ...